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Open Access Research

Molecular genetic studies and delineation of the oculocutaneous albinism phenotype in the Pakistani population

Thomas J Jaworek1, Tasleem Kausar12, Shannon M Bell1, Nabeela Tariq2, Muhammad Imran Maqsood2, Asma Sohail2, Muhmmmad Ali2, Furhan Iqbal2, Shafqat Rasool3, Saima Riazuddin1456, Rehan S Shaikh2* and Zubair M Ahmed12456*

Author Affiliations

1 Division of Pediatric Ophthalmology, Cincinnati Children’s Hospital Research Foundation, Cincinnati, OH, 45229, USA

2 Institute of Molecular Biology & Biotechnology, Bahauddin Zakariya University, Multan, 60800, Pakistan

3 Department of Ophthalmology, Nishter Hospital, Multan, Pakistan

4 Department of Ophthalmology, College of Medicine, University of Cincinnati, Cincinnati, OH, 45229, USA

5 Division of Pediatric Otolaryngology Head & Neck Surgery, Cincinnati Children’s Hospital Research Foundation, Cincinnati, OH, 45229, USA

6 Department of Otolaryngology, College of Medicine, University of Cincinnati, Cincinnati, OH, 45229, USA

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Orphanet Journal of Rare Diseases 2012, 7:44  doi:10.1186/1750-1172-7-44

Published: 26 June 2012

Abstract

Background

Oculocutaneous albinism (OCA) is caused by a group of genetically heterogeneous inherited defects that result in the loss of pigmentation in the eyes, skin and hair. Mutations in the TYR, OCA2, TYRP1 and SLC45A2 genes have been shown to cause isolated OCA. No comprehensive analysis has been conducted to study the spectrum of OCA alleles prevailing in Pakistani albino populations.

Methods

We enrolled 40 large Pakistani families and screened them for OCA genes and a candidate gene, SLC24A5. Protein function effects were evaluated using in silico prediction algorithms and ex vivo studies in human melanocytes. The effects of splice-site mutations were determined using an exon-trapping assay.

Results

Screening of the TYR gene revealed four known (p.Arg299His, p.Pro406Leu, p.Gly419Arg, p.Arg278*) and three novel mutations (p.Pro21Leu, p.Cys35Arg, p.Tyr411His) in ten families. Ex vivo studies revealed the retention of an EGFP-tagged mutant (p.Pro21Leu, p.Cys35Arg or p.Tyr411His) tyrosinase in the endoplasmic reticulum (ER) at 37°C, but a significant fraction of p.Cys35Arg and p.Tyr411His left the ER in cells grown at a permissive temperature (31°C). Three novel (p.Asp486Tyr, p.Leu527Arg, c.1045-15 T > G) and two known mutations (p.Pro743Leu, p.Ala787Thr) of OCA2 were found in fourteen families. Exon-trapping assays with a construct containing a novel c.1045-15 T > G mutation revealed an error in splicing. No mutation in TYRP1, SLC45A2, and SLC24A5 was found in the remaining 16 families. Clinical evaluation of the families segregating either TYR or OCA2 mutations showed nystagmus, photophobia, and loss of pigmentation in the skin or hair follicles. Most of the affected individuals had grayish-blue colored eyes.

Conclusions

Our results show that ten and fourteen families harbored mutations in the TYR and OCA2 genes, respectively. Our findings, along with the results of previous studies, indicate that the p.Cys35Arg, p.Arg278* and p.Gly419Arg alleles of TYR and the p.Asp486Tyr and c.1045-15 T > G alleles of OCA2 are the most common causes of OCA in Pakistani families. To the best of our knowledge, this study represents the first documentation of OCA2 alleles in the Pakistani population. A significant proportion of our cohort did not have mutations in known OCA genes. Overall, our study contributes to the development of genetic testing protocols and genetic counseling for OCA in Pakistani families.

Keywords:
TYR; OCA2; TYRP1; SLC45A2; SLC24A5; Pakistan; Exon-trapping; Oculocutaneous Albinism; Melanocytes; Hypopigmentation